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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs62019934 chr15:40969640 G/A 1.64E-5 66 27.87 26.12 17.07 KM Plot
UVM rs6438946 chr3:125649817 C/T 0.000104 65 25.32 33.23 7.6 KM Plot
UVM rs6488065 chr12:9788572 A/G 0.000108 67 27.62 23.4 7.6 KM Plot
UVM rs6598202 chr12:132617807 C/T 3.4E-7 67 31.83 23.25 0.73 KM Plot
UVM rs6713233 chr2:201819627 G/A 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs67432048 chr2:239022417 A/G 4.67E-5 67 27.37 24.6 1.18 KM Plot
UVM rs6754564 chr2:201779932 C/T 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs71184928 chr22:24260216 CTTTTTTTTT/C 0.000137 66 7.6 34.88 24.77 KM Plot
UVM rs7132037 chr12:9809353 C/T 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs7133187 chr12:132595647 T/G 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs7134173 chr12:132586159 C/G 4.5E-7 66 31.55 23.25 0.73 KM Plot
UVM rs7136649 chr12:132598995 C/T 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs7136821 chr12:9773507 C/T 0.00014 66 27.37 21.8 7.6 KM Plot
UVM rs7138351 chr12:132614254 T/C 4.6E-7 65 31.83 23.25 0.73 KM Plot
UVM rs71457488 chr12:9811329 C/CA 0.000125 67 27.88 21.8 7.6 KM Plot